umair-tahoe commited on
Commit
f189639
·
1 Parent(s): 07fe458

add explicit chemical encoder params

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Files changed (1) hide show
  1. 3b-model/model_config.yml +2 -3
3b-model/model_config.yml CHANGED
@@ -37,9 +37,8 @@ expression_decoder:
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  n_layers: 1
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  activation: gelu
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  chemical_encoder:
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- drug_fps_path:
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- remote: s3://vevo-ml-datasets/mosaicfm_v2/datasets/drug_fps_pad.npy
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- local: drug_fps_pad.npy
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  activation: gelu
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  padding_idx: 0
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  freeze: false
 
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  n_layers: 1
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  activation: gelu
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  chemical_encoder:
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+ num_drugs: 378
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+ fp_dim: 2048
 
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  activation: gelu
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  padding_idx: 0
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  freeze: false