Datasets:

electricsheepafrica
/

ssa-breast-integrated-ml

sample_id stringlengths 23 23	population stringclasses 7 values	region stringclasses 5 values	is_SSA bool 2 classes	is_reference_panel bool 2 classes	sex stringclasses 2 values	age int64 18 90 ⌀	bmi float64 14 47.1 ⌀	ses stringclasses 3 values	prs_category stringclasses 3 values	prs_standardized float64 -2.99 2.55 ⌀	high_risk_germline bool 2 classes	stage_at_diagnosis stringclasses 4 values	grade int64 1 3 ⌀	tumour_size_cm float64 0.2 13.8 ⌀	treatment_regimen stringclasses 5 values	tumor_subtype stringclasses 5 values	er_status stringclasses 2 values	pr_status stringclasses 2 values	her2_status stringclasses 2 values	nlr_category stringclasses 3 values	triple_negative bool 2 classes	os_time_years float64 0 9.99 ⌀	os_event bool 2 classes
INTEGRATED_SAMPLE_00001	SSA_West	West	true	false	Female	53	25.2	High	Low	-0.192	false	III	3	7.33	Endocrine_only	Luminal_A	Positive	Positive	Negative	Low	false	6.208	false
INTEGRATED_SAMPLE_00002	SSA_West	West	true	false	Female	39	24.2	Low	Average	-0.403	false	IV	3	7.46	Palliative_only	Basal_like	Negative	Negative	Negative	Intermediate	true	2.356	false
INTEGRATED_SAMPLE_00003	SSA_West	West	true	false	Female	58	29.7	Low	High	-0.283	false	III	3	4.68	Chemo_plus_targeted	Basal_like	Negative	Negative	Negative	Intermediate	true	0.056	true
INTEGRATED_SAMPLE_00004	SSA_West	West	true	false	Female	60	28.8	Middle	Average	0.36	false	II	2	1.43	Chemo_only	Luminal_A	Positive	Positive	Positive	Intermediate	false	5.918	true
INTEGRATED_SAMPLE_00005	SSA_West	West	true	false	Female	29	20.5	Middle	Average	-0.925	false	II	2	2.32	Chemo_only	HER2_enriched	Positive	Positive	Positive	Intermediate	false	2.987	true
INTEGRATED_SAMPLE_00006	SSA_West	West	true	false	Female	36	33.1	Low	Average	0.458	false	I	3	2.01	Endocrine_only	HER2_enriched	Positive	Positive	Positive	Intermediate	false	4.679	true
INTEGRATED_SAMPLE_00007	SSA_West	West	true	false	Female	51	27	Middle	Average	0.19	false	IV	3	11.17	Endocrine_only	Basal_like	Negative	Negative	Negative	Low	true	0.09	true
INTEGRATED_SAMPLE_00008	SSA_West	West	true	false	Female	47	21.9	Low	High	0.759	false	II	2	4.73	Endocrine_only	Basal_like	Negative	Negative	Negative	Intermediate	true	0.268	true
INTEGRATED_SAMPLE_00009	SSA_West	West	true	false	Female	50	33.4	Middle	High	-0.179	false	IV	3	8.61	Chemo_only	Basal_like	Negative	Negative	Negative	Low	true	0.943	true
INTEGRATED_SAMPLE_00010	SSA_West	West	true	false	Female	41	30.6	Middle	Low	-0.779	false	IV	2	6.65	Chemo_plus_targeted	Basal_like	Negative	Negative	Negative	High	true	1.805	true
INTEGRATED_SAMPLE_00011	SSA_West	West	true	false	Female	60	21.2	Low	Low	-0.171	false	I	2	2.21	Chemo_only	Basal_like	Negative	Negative	Negative	Low	true	3.984	false
INTEGRATED_SAMPLE_00012	SSA_West	West	true	false	Female	59	36.4	High	Low	-0.503	false	III	3	7.14	Endocrine_only	Basal_like	Negative	Negative	Negative	High	true	0.343	true
INTEGRATED_SAMPLE_00013	SSA_West	West	true	false	Female	51	30.8	High	Average	1.488	false	II	2	1.85	Chemo_only	HER2_enriched	Positive	Positive	Positive	High	false	0.934	true
INTEGRATED_SAMPLE_00014	SSA_West	West	true	false	Female	62	27.4	Low	High	1.115	true	III	3	5.62	Chemo_only	Luminal_A	Positive	Positive	Negative	Low	false	0.74	true
INTEGRATED_SAMPLE_00015	SSA_West	West	true	false	Female	55	35.5	Low	Average	0.615	false	IV	3	8.82	Surgery_only	Luminal_A	Positive	Positive	Negative	High	false	0.847	false
INTEGRATED_SAMPLE_00016	SSA_West	West	true	false	Female	41	28.3	Middle	Average	-0.32	false	IV	2	9.75	Chemo_plus_targeted	Basal_like	Negative	Negative	Negative	Low	true	0.472	true
INTEGRATED_SAMPLE_00017	SSA_West	West	true	false	Female	54	27.4	Low	Average	0.406	false	III	2	7.91	Chemo_plus_targeted	Luminal_B	Positive	Positive	Negative	Low	false	0.228	true
INTEGRATED_SAMPLE_00018	SSA_West	West	true	false	Female	39	24.2	Low	High	0.259	false	III	3	5.65	Endocrine_only	Basal_like	Negative	Negative	Negative	Intermediate	true	3.832	true
INTEGRATED_SAMPLE_00019	SSA_West	West	true	false	Female	60	30.4	Low	Low	-0.719	false	II	2	2.76	Endocrine_only	Luminal_B	Positive	Positive	Negative	High	false	5.219	false
INTEGRATED_SAMPLE_00020	SSA_West	West	true	false	Female	49	29.9	High	Average	-0.968	false	II	2	1.82	Chemo_only	Luminal_B	Positive	Positive	Negative	Intermediate	false	0.589	true
INTEGRATED_SAMPLE_00021	SSA_West	West	true	false	Female	48	27.6	Low	Average	0.098	false	III	3	6.66	Chemo_plus_targeted	Basal_like	Negative	Negative	Negative	Intermediate	true	6.83	true
INTEGRATED_SAMPLE_00022	SSA_West	West	true	false	Female	43	23.6	Middle	Average	-0.091	false	I	2	2.74	Chemo_plus_targeted	Luminal_B	Positive	Positive	Negative	Intermediate	false	5.739	false
INTEGRATED_SAMPLE_00023	SSA_West	West	true	false	Female	63	28.1	Low	Average	0.346	false	III	1	6.81	Chemo_plus_targeted	Basal_like	Negative	Negative	Negative	High	true	0.502	true
INTEGRATED_SAMPLE_00024	SSA_West	West	true	false	Female	48	27.2	Low	Average	-0.599	false	IV	1	6.76	Palliative_only	Luminal_A	Positive	Positive	Positive	Low	false	0.207	true
INTEGRATED_SAMPLE_00025	SSA_West	West	true	false	Female	45	20.8	High	High	0.579	false	III	3	6.35	Chemo_plus_targeted	Basal_like	Negative	Negative	Negative	Intermediate	true	0.305	true
INTEGRATED_SAMPLE_00026	SSA_West	West	true	false	Female	46	20.1	Low	Average	0.4	true	II	2	5.11	Chemo_only	Luminal_A	Positive	Positive	Negative	High	false	8.463	false
INTEGRATED_SAMPLE_00027	SSA_West	West	true	false	Female	56	30.3	Low	High	1.135	false	III	2	4.83	Chemo_only	Basal_like	Negative	Negative	Negative	High	true	0.034	true
INTEGRATED_SAMPLE_00028	SSA_West	West	true	false	Female	54	14.5	Low	Average	-0.264	false	III	2	6.57	Chemo_only	Basal_like	Negative	Negative	Negative	Intermediate	true	0.207	true
INTEGRATED_SAMPLE_00029	SSA_West	West	true	false	Female	55	28.5	Middle	High	0.336	false	II	2	7.63	Palliative_only	Luminal_B	Positive	Positive	Negative	Intermediate	false	0.861	false
INTEGRATED_SAMPLE_00030	SSA_West	West	true	false	Female	55	25.1	Low	Low	-0.181	false	II	1	6.94	Surgery_only	Luminal_A	Positive	Positive	Negative	High	false	1.596	true
INTEGRATED_SAMPLE_00031	SSA_West	West	true	false	Male	74	34	Low	Average	-1.093	false	III	3	4.48	Chemo_plus_targeted	Basal_like	Negative	Negative	Negative	Low	true	2.965	true
INTEGRATED_SAMPLE_00032	SSA_West	West	true	false	Female	46	25	Low	Low	-0.644	false	IV	3	6.57	Palliative_only	Basal_like	Negative	Negative	Negative	High	true	0.008	true
INTEGRATED_SAMPLE_00033	SSA_West	West	true	false	Female	44	30.8	Low	Average	-0.101	false	II	2	4.05	Chemo_plus_targeted	Luminal_B	Positive	Positive	Negative	Intermediate	false	0.016	true
INTEGRATED_SAMPLE_00034	SSA_West	West	true	false	Female	41	25.5	Low	Low	-0.916	false	III	3	6.87	Chemo_only	Luminal_A	Positive	Negative	Negative	Intermediate	false	1.474	true
INTEGRATED_SAMPLE_00035	SSA_West	West	true	false	Female	57	28.1	Middle	Low	-0.592	false	III	2	7.82	Chemo_plus_targeted	Basal_like	Negative	Negative	Negative	High	true	0.435	true
INTEGRATED_SAMPLE_00036	SSA_West	West	true	false	Female	62	31.2	Low	Average	0.254	false	IV	3	9.65	Chemo_plus_targeted	HER2_enriched	Positive	Negative	Positive	Intermediate	false	0.611	true
INTEGRATED_SAMPLE_00037	SSA_West	West	true	false	Female	49	25.2	Low	Low	-0.514	false	I	1	3.76	Surgery_only	Basal_like	Negative	Negative	Negative	Intermediate	true	1.637	false
INTEGRATED_SAMPLE_00038	SSA_West	West	true	false	Female	41	32.5	Middle	Average	1.206	false	III	3	6.91	Chemo_only	Luminal_A	Negative	Positive	Positive	Intermediate	false	4.252	true
INTEGRATED_SAMPLE_00039	SSA_West	West	true	false	Female	41	22.5	Middle	High	1.129	false	IV	2	7.53	Palliative_only	Basal_like	Negative	Negative	Negative	Low	true	1.513	true
INTEGRATED_SAMPLE_00040	SSA_West	West	true	false	Female	57	29	Low	Low	-0.682	false	II	1	6.05	Chemo_only	Luminal_B	Positive	Positive	Negative	Intermediate	false	2.07	false
INTEGRATED_SAMPLE_00041	SSA_West	West	true	false	Female	58	32.1	Low	Low	-0.948	false	II	2	6.68	Chemo_only	Luminal_A	Positive	Positive	Negative	Intermediate	false	7.299	false
INTEGRATED_SAMPLE_00042	SSA_West	West	true	false	Female	56	30.8	Low	Low	-0.891	false	I	2	0.89	Chemo_only	HER2_enriched	Negative	Negative	Positive	High	false	1.696	false
INTEGRATED_SAMPLE_00043	SSA_West	West	true	false	Female	43	37.1	High	Average	0.931	false	II	2	3.65	Endocrine_only	HER2_enriched	Positive	Negative	Positive	Low	false	2.014	true
INTEGRATED_SAMPLE_00044	SSA_West	West	true	false	Female	53	23.7	Low	Average	0.182	false	IV	3	9.21	Palliative_only	Luminal_B	Positive	Positive	Positive	Low	false	0.017	true
INTEGRATED_SAMPLE_00045	SSA_West	West	true	false	Female	51	20.6	Low	Low	0.115	false	II	3	3.77	Chemo_only	Basal_like	Negative	Negative	Positive	Low	false	7.648	false
INTEGRATED_SAMPLE_00046	SSA_West	West	true	false	Female	52	22.5	Low	Average	-0.43	false	III	3	4.18	Chemo_plus_targeted	Luminal_A	Positive	Positive	Negative	Low	false	3.62	false
INTEGRATED_SAMPLE_00047	SSA_West	West	true	false	Female	60	30.8	Low	Average	-0.068	false	II	3	5.27	Chemo_only	Luminal_B	Positive	Positive	Negative	Low	false	1.325	true
INTEGRATED_SAMPLE_00048	SSA_West	West	true	false	Female	52	30	Low	Average	-0.171	true	III	3	5.89	Chemo_plus_targeted	Basal_like	Negative	Negative	Negative	Intermediate	true	1.912	true
INTEGRATED_SAMPLE_00049	SSA_West	West	true	false	Female	57	28	Low	High	0.757	false	III	3	6.1	Chemo_plus_targeted	Basal_like	Negative	Negative	Negative	Low	true	0.411	true
INTEGRATED_SAMPLE_00050	SSA_West	West	true	false	Female	51	21.9	Middle	Average	0.84	false	III	2	7.89	Endocrine_only	Luminal_A	Positive	Positive	Negative	Intermediate	false	3.258	true
INTEGRATED_SAMPLE_00051	SSA_West	West	true	false	Female	53	31.3	Middle	High	1	false	II	2	3.18	Surgery_only	Basal_like	Negative	Negative	Negative	Low	true	6.162	false
INTEGRATED_SAMPLE_00052	SSA_West	West	true	false	Female	57	21.4	Middle	Low	-0.289	false	III	3	7.08	Chemo_only	Basal_like	Positive	Negative	Positive	Intermediate	false	0.513	true
INTEGRATED_SAMPLE_00053	SSA_West	West	true	false	Female	34	33.3	Middle	Average	0.905	false	III	1	0.87	Surgery_only	Basal_like	Negative	Positive	Negative	Intermediate	false	1.805	true
INTEGRATED_SAMPLE_00054	SSA_West	West	true	false	Female	46	41.8	Low	Low	-1.037	false	II	2	3.46	Chemo_plus_targeted	Basal_like	Negative	Negative	Negative	Intermediate	true	2.729	false
INTEGRATED_SAMPLE_00055	SSA_West	West	true	false	Female	45	29.3	High	Average	0.006	false	III	3	5.61	Chemo_only	Luminal_A	Positive	Positive	Negative	High	false	1.576	true
INTEGRATED_SAMPLE_00056	SSA_West	West	true	false	Female	43	30.4	Middle	Average	0.852	false	II	2	8.12	Endocrine_only	Luminal_A	Positive	Positive	Negative	Low	false	5.841	true
INTEGRATED_SAMPLE_00057	SSA_West	West	true	false	Female	47	25	Middle	Low	-0.127	false	III	3	4.44	Surgery_only	Basal_like	Negative	Negative	Negative	Intermediate	true	5.01	false
INTEGRATED_SAMPLE_00058	SSA_West	West	true	false	Female	66	18.4	Middle	Average	0.845	false	I	2	0.2	Surgery_only	Basal_like	Negative	Negative	Negative	Intermediate	true	5.576	false
INTEGRATED_SAMPLE_00059	SSA_West	West	true	false	Female	40	24.5	Low	High	0.727	false	I	1	2.49	Surgery_only	Basal_like	Negative	Negative	Negative	Intermediate	true	6.17	false
INTEGRATED_SAMPLE_00060	SSA_West	West	true	false	Female	61	22	Low	Average	0.371	false	I	2	1.88	Surgery_only	Luminal_A	Positive	Positive	Negative	High	false	6.602	false
INTEGRATED_SAMPLE_00061	SSA_West	West	true	false	Female	31	20.3	Low	High	1.612	false	I	1	4.49	Surgery_only	HER2_enriched	Negative	Positive	Positive	Intermediate	false	9.755	false
INTEGRATED_SAMPLE_00062	SSA_West	West	true	false	Female	46	36.1	Low	Average	-0.45	false	III	3	5.06	Palliative_only	Basal_like	Negative	Negative	Negative	High	true	0.019	true
INTEGRATED_SAMPLE_00063	SSA_West	West	true	false	Female	52	28.9	Middle	Average	0.252	false	IV	3	5.46	Palliative_only	Basal_like	Negative	Positive	Negative	Low	false	1.002	true
INTEGRATED_SAMPLE_00064	SSA_West	West	true	false	Female	56	29.4	Low	Low	-0.62	false	IV	3	3.92	Chemo_plus_targeted	Basal_like	Negative	Negative	Negative	Intermediate	true	0.262	true
INTEGRATED_SAMPLE_00065	SSA_West	West	true	false	Female	58	26	Low	High	0.978	false	III	2	3.45	Chemo_only	Basal_like	Negative	Negative	Negative	Intermediate	true	0.918	true
INTEGRATED_SAMPLE_00066	SSA_West	West	true	false	Female	59	26.6	High	Low	0.138	false	I	1	4.6	Surgery_only	Luminal_A	Positive	Positive	Positive	Low	false	4.533	false
INTEGRATED_SAMPLE_00067	SSA_West	West	true	false	Female	46	32.3	Middle	Average	-0.043	false	II	2	7.23	Chemo_only	HER2_enriched	Negative	Positive	Positive	Intermediate	false	6.101	true
INTEGRATED_SAMPLE_00068	SSA_West	West	true	false	Female	45	27.3	Middle	Low	-0.166	false	III	3	9.8	Chemo_only	Luminal_B	Positive	Positive	Negative	Intermediate	false	6.287	false
INTEGRATED_SAMPLE_00069	SSA_West	West	true	false	Female	59	30.2	Low	High	-0.228	false	IV	3	7.21	Chemo_plus_targeted	Luminal_A	Positive	Positive	Negative	Intermediate	false	0.094	true
INTEGRATED_SAMPLE_00070	SSA_West	West	true	false	Female	48	26.5	Middle	Average	-0.001	false	II	2	5.6	Endocrine_only	Basal_like	Positive	Negative	Negative	Intermediate	false	0.614	true
INTEGRATED_SAMPLE_00071	SSA_West	West	true	false	Female	36	25.8	High	Average	-0.043	false	III	3	9.15	Endocrine_only	Luminal_A	Positive	Positive	Negative	Intermediate	false	0.984	true
INTEGRATED_SAMPLE_00072	SSA_West	West	true	false	Female	38	20.5	Middle	Average	-1.24	false	II	3	3.63	Surgery_only	Basal_like	Negative	Negative	Negative	High	true	1.448	false
INTEGRATED_SAMPLE_00073	SSA_West	West	true	false	Female	40	17.6	Middle	Average	-0.798	false	IV	3	10.46	Palliative_only	Basal_like	Negative	Negative	Negative	Low	true	0.106	true
INTEGRATED_SAMPLE_00074	SSA_West	West	true	false	Female	55	26.2	Middle	Low	-1.093	false	II	3	5.33	Chemo_only	Luminal_A	Positive	Positive	Negative	Low	false	4.118	false
INTEGRATED_SAMPLE_00075	SSA_West	West	true	false	Female	52	27.8	Low	Low	-1.371	true	III	3	10.91	Chemo_plus_targeted	Luminal_A	Positive	Positive	Negative	Intermediate	false	6.29	true
INTEGRATED_SAMPLE_00076	SSA_West	West	true	false	Female	58	21.1	Middle	Average	-0.243	false	I	2	2.74	Chemo_plus_targeted	Luminal_A	Positive	Positive	Negative	High	false	5.19	false
INTEGRATED_SAMPLE_00077	SSA_West	West	true	false	Female	45	27.3	High	Low	-0.678	false	III	3	7.38	Chemo_plus_targeted	Basal_like	Negative	Negative	Negative	High	true	0.456	true
INTEGRATED_SAMPLE_00078	SSA_West	West	true	false	Female	52	27.8	Low	High	0.588	false	IV	2	6.18	Palliative_only	Luminal_A	Positive	Positive	Negative	High	false	0.026	true
INTEGRATED_SAMPLE_00079	SSA_West	West	true	false	Male	57	16.7	Low	High	1.235	false	I	3	0.8	Surgery_only	Basal_like	Negative	Negative	Negative	Low	true	0.172	true
INTEGRATED_SAMPLE_00080	SSA_West	West	true	false	Female	47	22.9	Low	Average	-0.644	false	IV	3	6.17	Chemo_only	Luminal_B	Positive	Negative	Negative	Low	false	0.777	true
INTEGRATED_SAMPLE_00081	SSA_West	West	true	false	Female	55	29.5	Low	Average	0.11	false	IV	3	5.04	Chemo_plus_targeted	Luminal_A	Positive	Positive	Negative	Low	false	0.974	true
INTEGRATED_SAMPLE_00082	SSA_West	West	true	false	Female	43	29.4	High	Average	0.309	false	II	1	4.98	Chemo_only	HER2_enriched	Positive	Positive	Positive	Intermediate	false	6.322	false
INTEGRATED_SAMPLE_00083	SSA_West	West	true	false	Female	46	21.7	Middle	Average	-1.183	false	III	3	6.74	Surgery_only	Luminal_A	Positive	Positive	Negative	Intermediate	false	1.451	true
INTEGRATED_SAMPLE_00084	SSA_West	West	true	false	Female	46	28.3	Low	Low	-0.932	false	II	3	4.94	Endocrine_only	Basal_like	Negative	Negative	Positive	Low	false	5.371	false
INTEGRATED_SAMPLE_00085	SSA_West	West	true	false	Female	37	32.6	Low	Average	-0.108	false	IV	3	7.86	Palliative_only	Luminal_A	Positive	Negative	Negative	Low	false	0.501	true
INTEGRATED_SAMPLE_00086	SSA_West	West	true	false	Female	55	31.4	Low	Low	-1.226	false	III	3	4.1	Chemo_only	Basal_like	Negative	Negative	Positive	Intermediate	false	2.506	false
INTEGRATED_SAMPLE_00087	SSA_West	West	true	false	Female	45	27	Low	Average	-0.272	false	IV	3	5.9	Palliative_only	Basal_like	Negative	Negative	Negative	Intermediate	true	0.202	true
INTEGRATED_SAMPLE_00088	SSA_West	West	true	false	Female	50	25.2	Middle	Average	-0.835	false	II	3	2.06	Chemo_only	Luminal_B	Positive	Positive	Negative	Low	false	2.431	false
INTEGRATED_SAMPLE_00089	SSA_West	West	true	false	Female	55	24.4	Middle	Average	-0.266	false	III	3	8.16	Chemo_only	Luminal_A	Positive	Positive	Negative	Intermediate	false	5.419	false
INTEGRATED_SAMPLE_00090	SSA_West	West	true	false	Female	55	29.8	Middle	Low	-0.84	false	III	2	3.93	Chemo_only	HER2_enriched	Positive	Positive	Positive	High	false	5.284	true
INTEGRATED_SAMPLE_00091	SSA_West	West	true	false	Female	57	28.5	Low	Average	0.104	false	II	2	5.4	Chemo_plus_targeted	Luminal_A	Positive	Positive	Negative	Low	false	4.315	true
INTEGRATED_SAMPLE_00092	SSA_West	West	true	false	Female	49	30.6	Middle	Low	-1.255	false	I	1	0.2	Palliative_only	HER2_enriched	Negative	Positive	Positive	High	false	2.896	false
INTEGRATED_SAMPLE_00093	SSA_West	West	true	false	Female	45	28.2	Middle	Average	-0.117	false	IV	3	9.49	Palliative_only	Basal_like	Negative	Negative	Positive	Low	false	0.106	true
INTEGRATED_SAMPLE_00094	SSA_West	West	true	false	Female	49	31.6	Low	Average	-0.026	false	III	3	4.77	Endocrine_only	Basal_like	Negative	Negative	Negative	Low	true	1.387	true
INTEGRATED_SAMPLE_00095	SSA_West	West	true	false	Female	31	28	Middle	High	0.134	false	II	3	4.08	Surgery_only	HER2_enriched	Positive	Negative	Positive	Low	false	3.401	true
INTEGRATED_SAMPLE_00096	SSA_West	West	true	false	Female	34	31.4	Middle	Average	-0.319	false	IV	3	8.94	Chemo_only	Basal_like	Negative	Negative	Negative	Intermediate	true	1.02	true
INTEGRATED_SAMPLE_00097	SSA_West	West	true	false	Female	35	31.9	Middle	Average	-0.49	false	II	3	0.52	Chemo_only	Luminal_A	Positive	Positive	Negative	Intermediate	false	6.913	false
INTEGRATED_SAMPLE_00098	SSA_West	West	true	false	Female	39	23.5	Low	Low	-1.161	false	III	3	8.86	Chemo_plus_targeted	Luminal_A	Positive	Positive	Negative	Intermediate	false	0.109	true
INTEGRATED_SAMPLE_00099	SSA_West	West	true	false	Female	54	18.5	Low	Low	-1.041	false	I	2	0.2	Surgery_only	Basal_like	Negative	Negative	Negative	Intermediate	true	2.528	true
INTEGRATED_SAMPLE_00100	SSA_West	West	true	false	Female	40	35.2	Middle	Low	-1.106	false	III	3	3.84	Chemo_only	Basal_like	Negative	Negative	Negative	Intermediate	true	1.841	true

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SSA Breast Integrated Genomic-Clinical ML Dataset (Multi-ancestry) | Africa (Electric Sheep Africa metadata inventory)

Size category: 10K<n<100K - Formats: parquet - Sector: health - Engineered by Electric Sheep Africa

TL;DR

This dataset is part of the Electric Sheep Africa catalog on Hugging Face. It is indexed for African data discovery with standardized metadata, loading guidance, provenance notes, and analyst-oriented context.

What This Dataset Covers

Health datasets help researchers examine disease burden, service delivery, risk factors, outcomes, and public-health program performance.

Dataset context from the existing Hugging Face card: SSA Breast Integrated Genomic-Clinical ML Dataset (Multi-ancestry, Synthetic) Dataset summary This module provides an integrated, machine-learning–ready synthetic dataset that links: Genotype (polygenic risk score, high-risk germline carrier flag). Clinical and pathological phenotype (stage, grade, tumour size, ER/PR/HER2, subtype). Key confounders (age, BMI, socioeconomic status, treatment regimen). Longitudinal biomarkers (tumour burden and neutrophil-to-lymphocyte… See the full description on the dataset page: https://huggingface.co/datasets/electricsheepafrica/ssa-breast-integrated-ml.

Dataset Profile

Field	Value
Hugging Face repo	`electricsheepafrica/ssa-breast-integrated-ml`
Sector	health
Topic tags	integrated-dataset, survival-analysis, polygenic-risk-score, longitudinal-biomarkers, breast-cancer, sub-saharan-africa
Modalities	`tabular`, `text`
Formats	`parquet`
Size category	`10K<n<100K`
Countries	Africa-wide or source-defined African coverage
ISO3 coverage	`not declared`
Last modified on HF	`2025-11-25 13:48:26+00:00`
Inventory snapshot	`2026-07-16T16:00:34Z`

How To Read This Dataset

Start from the repository files and the dataset viewer when available.
Treat the README context as a fast orientation layer; confirm variable definitions and units in the data files before modeling.
Use explicit country columns when present. When geography is only implied by the title or source metadata, document that assumption in downstream analysis.
Preserve missing values until you have a defensible imputation rule.

Usage

from datasets import load_dataset

ds = load_dataset("electricsheepafrica/ssa-breast-integrated-ml")
print(ds)

split_name = next(iter(ds))
table = ds[split_name]
print(table.features)
print(table[:3])

Convert To Pandas When Tabular

from datasets import Dataset

first_split = ds[next(iter(ds))]
if isinstance(first_split, Dataset):
    df = first_split.to_pandas()
    print(df.head())

Data Quality Notes

This card was standardized from the Electric Sheep Africa Hugging Face metadata inventory.
Exact schema, row counts, and source files should be inspected in the repository data files.
Metadata gaps from the inventory: country, upstream_publisher.
Do not infer policy meaning from labels alone; confirm definitions, units, and methods in the source material.

Source And Provenance

Source context: Electric Sheep Africa metadata inventory
Publisher/source attribution: Public dataset metadata
License: cc-by-nc-4.0
Hugging Face URL: https://huggingface.co/datasets/electricsheepafrica/ssa-breast-integrated-ml
Inventory retrieved at: 2026-07-16T16:00:34Z

Suggested Analyses

Inspect schema and missingness before modeling.
Profile variables by geography, time, and subgroup columns where present.
Join with other Electric Sheep Africa datasets using explicit country, year, and indicator fields when available.
Build reproducible notebooks that cite both the original source context and the Electric Sheep Africa Hugging Face repo.

Citation

@misc{electric_sheep_africa_ssa_breast_integrated_ml_2026,
  title        = {SSA Breast Integrated Genomic-Clinical ML Dataset (Multi-ancestry) | Africa (Electric Sheep Africa metadata inventory)},
  author       = {Public dataset metadata},
  year         = {2026},
  url          = {https://huggingface.co/datasets/electricsheepafrica/ssa-breast-integrated-ml},
  publisher    = {Hugging Face Datasets, engineered by Electric Sheep Africa},
  howpublished = {\url{https://huggingface.co/datasets/electricsheepafrica/ssa-breast-integrated-ml}}
}

License

Released under cc-by-nc-4.0.

Original source rights remain with the original publisher or data provider. Electric Sheep Africa engineering standardizes discovery metadata, documentation, and usage guidance for analysis on Hugging Face.

About Electric Sheep Africa

Electric Sheep Africa publishes ML-ready African public datasets on Hugging Face.

Provenance: metadata-backed README standardized 2026-08-12 by the Electric Sheep Africa README system. Inventory source: catalog/esa_metadata_inventory/master_metadata.jsonl.

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Collection including electricsheepafrica/ssa-breast-integrated-ml

Genomics

Collection

A collection of datasets on genomics in Sub-Saharan Africa • 21 items • Updated Nov 26, 2025 • 1