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systems-genomics-lab
/
deeptaxa
like
1
Follow
Systems Genomics Lab
6
Text Classification
PyTorch
systems-genomics-lab/greengenes
English
hybridcnnbert
bioinformatics
microbiology
microbiome
taxonomy-classification
deep-learning
16s-rrna
full-length-16s
v3-v4-amplicon
v4-amplicon
illumina
Eval Results (legacy)
arxiv:
2306.15006
License:
mit
Model card
Files
Files and versions
xet
Community
Copy to bucket
new
main
deeptaxa
6.43 GB
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Ctrl+K
2 contributors
History:
7 commits
ahmed-moustafa
Correct full-length 5-seed mean cells in the model card to match the released checkpoints
a96f26d
verified
16 days ago
.gitattributes
Safe
1.52 kB
Initial commit
3 months ago
MD5SUMS
Safe
1.12 kB
Update v2 five-seed checkpoints to the latest code (commit 11dae9c); refresh config, model card, and checksums
16 days ago
README.md
Safe
22.2 kB
Correct full-length 5-seed mean cells in the model card to match the released checkpoints
16 days ago
SHA256SUMS
Safe
1.7 kB
Update v2 five-seed checkpoints to the latest code (commit 11dae9c); refresh config, model card, and checksums
16 days ago
config.json
Safe
57 kB
Update v2 five-seed checkpoints to the latest code (commit 11dae9c); refresh config, model card, and checksums
16 days ago
deeptaxa-full-length-v1.pt
Safe
pickle
Detected Pickle imports (3)
"collections.OrderedDict"
,
"torch._utils._rebuild_tensor_v2"
,
"torch.FloatStorage"
What is a pickle import?
306 MB
xet
Initial commit
3 months ago
deeptaxa-full-length-v2-seed1011.pt
Safe
pickle
Detected Pickle imports (3)
"collections.OrderedDict"
,
"torch._utils._rebuild_tensor_v2"
,
"torch.FloatStorage"
What is a pickle import?
306 MB
xet
Update v2 five-seed checkpoints to the latest code (commit 11dae9c); refresh config, model card, and checksums
16 days ago
deeptaxa-full-length-v2-seed123.pt
Safe
pickle
Detected Pickle imports (3)
"torch.FloatStorage"
,
"collections.OrderedDict"
,
"torch._utils._rebuild_tensor_v2"
What is a pickle import?
306 MB
xet
Update v2 five-seed checkpoints to the latest code (commit 11dae9c); refresh config, model card, and checksums
16 days ago
deeptaxa-full-length-v2-seed42.pt
Safe
pickle
Detected Pickle imports (3)
"collections.OrderedDict"
,
"torch.FloatStorage"
,
"torch._utils._rebuild_tensor_v2"
What is a pickle import?
306 MB
xet
Update v2 five-seed checkpoints to the latest code (commit 11dae9c); refresh config, model card, and checksums
16 days ago
deeptaxa-full-length-v2-seed456.pt
Safe
pickle
Detected Pickle imports (3)
"torch.FloatStorage"
,
"torch._utils._rebuild_tensor_v2"
,
"collections.OrderedDict"
What is a pickle import?
306 MB
xet
Update v2 five-seed checkpoints to the latest code (commit 11dae9c); refresh config, model card, and checksums
16 days ago
deeptaxa-full-length-v2-seed789.pt
Safe
pickle
Detected Pickle imports (3)
"collections.OrderedDict"
,
"torch.FloatStorage"
,
"torch._utils._rebuild_tensor_v2"
What is a pickle import?
306 MB
xet
Update v2 five-seed checkpoints to the latest code (commit 11dae9c); refresh config, model card, and checksums
16 days ago
deeptaxa-full-length-v2.pt
Safe
pickle
Detected Pickle imports (3)
"collections.OrderedDict"
,
"torch.FloatStorage"
,
"torch._utils._rebuild_tensor_v2"
What is a pickle import?
306 MB
xet
Update v2 five-seed checkpoints to the latest code (commit 11dae9c); refresh config, model card, and checksums
16 days ago
deeptaxa-v3v4-v1.pt
Safe
pickle
Detected Pickle imports (3)
"torch._utils._rebuild_tensor_v2"
,
"collections.OrderedDict"
,
"torch.FloatStorage"
What is a pickle import?
304 MB
xet
Initial commit
3 months ago
deeptaxa-v3v4-v2-seed1011.pt
Safe
pickle
Detected Pickle imports (3)
"torch.FloatStorage"
,
"collections.OrderedDict"
,
"torch._utils._rebuild_tensor_v2"
What is a pickle import?
306 MB
xet
Update v2 five-seed checkpoints to the latest code (commit 11dae9c); refresh config, model card, and checksums
16 days ago
deeptaxa-v3v4-v2-seed123.pt
Safe
pickle
Detected Pickle imports (3)
"collections.OrderedDict"
,
"torch._utils._rebuild_tensor_v2"
,
"torch.FloatStorage"
What is a pickle import?
306 MB
xet
Update v2 five-seed checkpoints to the latest code (commit 11dae9c); refresh config, model card, and checksums
16 days ago
deeptaxa-v3v4-v2-seed42.pt
Safe
pickle
Detected Pickle imports (3)
"collections.OrderedDict"
,
"torch._utils._rebuild_tensor_v2"
,
"torch.FloatStorage"
What is a pickle import?
306 MB
xet
Update v2 five-seed checkpoints to the latest code (commit 11dae9c); refresh config, model card, and checksums
16 days ago
deeptaxa-v3v4-v2-seed456.pt
Safe
pickle
Detected Pickle imports (3)
"torch.FloatStorage"
,
"torch._utils._rebuild_tensor_v2"
,
"collections.OrderedDict"
What is a pickle import?
306 MB
xet
Update v2 five-seed checkpoints to the latest code (commit 11dae9c); refresh config, model card, and checksums
16 days ago
deeptaxa-v3v4-v2-seed789.pt
Safe
pickle
Detected Pickle imports (3)
"torch.FloatStorage"
,
"torch._utils._rebuild_tensor_v2"
,
"collections.OrderedDict"
What is a pickle import?
306 MB
xet
Update v2 five-seed checkpoints to the latest code (commit 11dae9c); refresh config, model card, and checksums
16 days ago
deeptaxa-v3v4-v2.pt
Safe
pickle
Detected Pickle imports (3)
"collections.OrderedDict"
,
"torch._utils._rebuild_tensor_v2"
,
"torch.FloatStorage"
What is a pickle import?
306 MB
xet
Update v2 five-seed checkpoints to the latest code (commit 11dae9c); refresh config, model card, and checksums
16 days ago
deeptaxa-v4-v1.pt
pickle
Detected Pickle imports (3)
"collections.OrderedDict"
,
"torch.FloatStorage"
,
"torch._utils._rebuild_tensor_v2"
What is a pickle import?
306 MB
xet
Add V4 (515F/806R) checkpoint: model weights, config variant, and model card
24 days ago
deeptaxa-v4-v2-seed1011.pt
Safe
pickle
Detected Pickle imports (3)
"collections.OrderedDict"
,
"torch.FloatStorage"
,
"torch._utils._rebuild_tensor_v2"
What is a pickle import?
306 MB
xet
Update v2 five-seed checkpoints to the latest code (commit 11dae9c); refresh config, model card, and checksums
16 days ago
deeptaxa-v4-v2-seed123.pt
Safe
pickle
Detected Pickle imports (3)
"collections.OrderedDict"
,
"torch.FloatStorage"
,
"torch._utils._rebuild_tensor_v2"
What is a pickle import?
306 MB
xet
Update v2 five-seed checkpoints to the latest code (commit 11dae9c); refresh config, model card, and checksums
16 days ago
deeptaxa-v4-v2-seed42.pt
Safe
pickle
Detected Pickle imports (3)
"collections.OrderedDict"
,
"torch._utils._rebuild_tensor_v2"
,
"torch.FloatStorage"
What is a pickle import?
306 MB
xet
Update v2 five-seed checkpoints to the latest code (commit 11dae9c); refresh config, model card, and checksums
16 days ago
deeptaxa-v4-v2-seed456.pt
Safe
pickle
Detected Pickle imports (3)
"collections.OrderedDict"
,
"torch._utils._rebuild_tensor_v2"
,
"torch.FloatStorage"
What is a pickle import?
306 MB
xet
Update v2 five-seed checkpoints to the latest code (commit 11dae9c); refresh config, model card, and checksums
16 days ago
deeptaxa-v4-v2-seed789.pt
Safe
pickle
Detected Pickle imports (3)
"collections.OrderedDict"
,
"torch.FloatStorage"
,
"torch._utils._rebuild_tensor_v2"
What is a pickle import?
306 MB
xet
Update v2 five-seed checkpoints to the latest code (commit 11dae9c); refresh config, model card, and checksums
16 days ago
deeptaxa-v4-v2.pt
Safe
pickle
Detected Pickle imports (3)
"collections.OrderedDict"
,
"torch._utils._rebuild_tensor_v2"
,
"torch.FloatStorage"
What is a pickle import?
306 MB
xet
Update v2 five-seed checkpoints to the latest code (commit 11dae9c); refresh config, model card, and checksums
16 days ago
